The detailed information of tRNA gene sequence


Sequence ID>AD01000344
Genome IDNC_003075
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr4
Start position on genome 16304124
End posion on genome 16304196
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gtcaatggaggagaaatatggccaactacaacagatcgttgactggttcgaaacttaatttatttactaattaatttgattgataacgaacaacaaaaag
tRNA gene sequence 
GCGCTCGTGGCCCAATGGATAAGGCGTCTGACTTCTAATCAGACGATTGTGGGTTCGATC
CCCACCGAGCGTGtct
Downstream region at tRNA end position 
cttccaaatacattttttccctttttcacaatagaattcatttaccgcaacaatcaaacgataacgaatcaacaaaaattacctgaaaaatattaaagct
Secondary structure (Cloverleaf model)
>AD01000344	Arg	TCT
                   g      Gtct cttccaaatacattttttccctttttcacaatagaattcatttaccgcaacaatcaaacgataacgaatcaacaaaaattacctgaaaaatattaaagct
                     G + T
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          C T
                    T     C A C C C     A
      T A A        G      | | | | |     G
    G       C C C G       G T G G G     C
    G         | | |                 T T
    A       A G G C
      T A          G     CGATT
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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