The detailed information of tRNA gene sequence


Sequence ID>AD01000359
Genome IDNC_003075
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr4
Start position on genome 13341566
End posion on genome 13341492
Amino Acid Ile
Anticodon AAT
Upstream region at tRNA start position 
gtagcacttgatacttacttgtcttgaaagaaaactgtcacagaatcacaatctaggcaattccgcgagaaatatttaatgtaccgtttataaccgcagt
tRNA gene sequence 
GGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCACAGGTTCGAT
CCCTGTATAGGCCACtt
Downstream region at tRNA end position 
ttttggctttcattttgatcaaactaaaacgtcatagagagagagagagcgatgattttctaaaagttttagaagattaaacacacattccatgtgtata
Secondary structure (Cloverleaf model)
>AD01000359	Ile	AAT
                   t      ACtt ttttggctttcattttgatcaaactaaaacgtcatagagagagagagagcgatgattttctaaaagttttagaagattaaacacacattccatgtgtata
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T
                     T - A          C T
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    T + G
                    G - C
                  C       A
                  T       A
                    A A T
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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