The detailed information of tRNA gene sequence


Sequence ID>AD01000382
Genome IDNC_003076
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr5
Start position on genome 998942
End posion on genome 999014
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
atgttagaagagttgagcaagtatattcatcaaattgttaaaagcgaacaaaaatattttacagaactatatatgttatttagctagcttacccaacaaa
tRNA gene sequence 
GCACCCGTGGCCTAATGGATAAGGCGTTTGACTTCTAATCACACGATTGTGGGTTCGAGT
CCCACCGGGTGTGtta
Downstream region at tRNA end position 
ttttccttttttttcctctattctgtcaaggatccatttttcagattttacttttttcttttaacacatacaagttcgaacttcgagccatatattatct
Secondary structure (Cloverleaf model)
>AD01000382	Arg	TCT
                   a      Gtta ttttccttttttttcctctattctgtcaaggatccatttttcagattttacttttttcttttaacacatacaagttcgaacttcgagccatatattatct
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    G       T C C G       G T G G G     C
    G       | | | |                 T T
    A       A G G C
      T A          G     CGATT
                    T - A
                    T   C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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