The detailed information of tRNA gene sequence


Sequence ID>AD01000399
Genome IDNC_003076
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr5
Start position on genome 6258145
End posion on genome 6258216
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttcacttaccgtttttcgtttgagttgattagaagaaactaaagcaaaggtcagaaaataatcaactaacaagtcgttaaatgcagatagtaaacaacaa
tRNA gene sequence 
GGGCGTTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGTCCCGAGTTCGATTC
TCGGAACGCCCCttc
Downstream region at tRNA end position 
ctttttactcattttaatgagttgacaagaaacacttctctcaggagccaaaaaatttaaaattttcaaaacattcttgaacctagaatctcattcacaa
Secondary structure (Cloverleaf model)
>AD01000399	Pro	TGG
                   a      Cttc ctttttactcattttaatgagttgacaagaaacacttctctcaggagccaaaaaatttaaaattttcaaaacattcttgaacctagaatctcattcacaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     T - A          T T
                    T     G G C T C     A
        G A        G      | | | | |     G
      T     T C T G       C C G A G     C
      G       | | +                 T T
      G     T G A T
        T A        T     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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