The detailed information of tRNA gene sequence


Sequence ID>AD01000408
Genome IDNC_003076
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr5
Start position on genome 16638166
End posion on genome 16638249
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
catcaaatctggataattacttaaagtaagcaacatacgtaaggtagacaactaggtgttaatcactatatatagtttgtagtagaaaacaatatcaaaa
tRNA gene sequence 
GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCGTAAGAGGGCG
TGGGTTCAAACCCCACTTCTGACAttt
Downstream region at tRNA end position 
ctgtttttagttttatgttcaatgactggatttttaaatttattatttttccgattaaagtagataactttttttacaacaaccattatttttttttttg
Secondary structure (Cloverleaf model)
>AD01000408	Leu	CAA
                   a      Attt ctgtttttagttttatgttcaatgactggatttttaaatttattatttttccgattaaagtagataactttttttacaacaaccattatttttttttttg
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C
                     G + T
                     A - T          C A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TCCTCGTAAGAGGGC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       T
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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