The detailed information of tRNA gene sequence


Sequence ID>AD01000419
Genome IDNC_003076
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr5
Start position on genome 22828131
End posion on genome 22828204
Amino Acid Ile
Anticodon AAT
Upstream region at tRNA start position 
gacaaagtttggcagatttgataaaacgacacagtttggttatgcatcctattttgtataattaaaattaggtagcttgattcaacttagtaataaaata
tRNA gene sequence 
GGCCCATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAA
ACCTGCATGGGCCAtca
Downstream region at tRNA end position 
attttttaactctgtcctttgtcgaaacgtcgtcgctttctttctttattagccgtcactcaaactataaatttggttaaactaatgggcctataactag
Secondary structure (Cloverleaf model)
>AD01000419	Ile	AAT
                   a      Atca attttttaactctgtcctttgtcgaaacgtcgtcgctttctttctttattagccgtcactcaaactataaatttggttaaactaatgggcctataactag
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          A A
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    T + G
                    G - C
                  C       A
                  T       A
                    A A T
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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