The detailed information of tRNA gene sequence


Sequence ID>AD01000422
Genome IDNC_003076
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr5
Start position on genome 23844205
End posion on genome 23844279
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtaacaaaagagatacgagactctctgcgaagttataaattatgtattatctatctctgttttactttttattttatcttatgtgattgctaatcaaaaT
tRNA gene sequence 
GTCGTTGTAGTATAGTGGTAAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCC
CCGGCAACGGCGTCt
Downstream region at tRNA end position 
attttttttctttcttttttggtgtaaatgttaaattttatactattttcttttttcatgttgcatacaatttattaatcaacctagtggaaggataaaa
Secondary structure (Cloverleaf model)
>AD01000422	Asp	GTC
                   T      GTCt attttttttctttcttttttggtgtaaatgttaaattttatactattttcttttttcatgttgcatacaatttattaatcaacctagtggaaggataaaa
                     G - C
                     T + G
                     C - G
                     G - C
                     T - A
                     T - A
                     G - C          C T
                    T     G G C C C     A
      T G A        A      | | | | |     G
    G       T A T G       C C G G G     C
    G       + | | +                 T T
    T       G T A T
      A A          T     TGAC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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