The detailed information of tRNA gene sequence


Sequence ID>AD03000009
Genome IDNC_003070
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr1
Start position on genome 21295872
End posion on genome 21295953
Amino Acid Ser
Anticodon AGA
Upstream region at tRNA start position 
tccttggaatcttctacttctcactcatgatcaaaatttaggatagagaatggtatacggtttagtctattttgaaataaaagtttagtttagagaaaaa
tRNA gene sequence 
GTGGACGTGCCGGAGTGGTTATCGGGAATGACTAGAAATCATGGGGGCTTTGCCCGCGCA
GGTTTGAATCTTGCCGTTTACGttt
Downstream region at tRNA end position 
ttattttgagtgttggtaagtttttaaaataacttattgtgttttatggatcgtttttcaatttgaacggttttccatcatgttaccgttttcagtaaaa
Secondary structure (Cloverleaf model)
>AD03000009	Ser	AGA
                   a      Gttt ttattttgagtgttggtaagtttttaaaataacttattgtgttttatggatcgtttttcaatttgaacggttttccatcatgttaccgttttcagtaaaa
                     G - C
                     T - A
                     G + T
                     G + T
                     A - T
                     C - G
                     G - C          T A
                    T     C G T T C     A
      T G A        G      | | | + |     G
    G       G G C C       G C A G G     T
    G       + | | |                 T T
    T       T C G G
      T A          G     GGGGCTTTGCCCGC
                    A   G
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    A G A
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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