The detailed information of tRNA gene sequence


Sequence ID>W1910001171
Genome IDAPHW01000028
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio rotiferianus CAIM 577 = LMG 21460 [APHW]
Start position on genome 8846
End posion on genome 8762
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gcctagagat
tRNA gene sequence 
GCCGGTGTGGTGAAATTGGTATACACGACGGATTCAAAATCCGTTGCCTTCGGGCGTGGC
GGTTCAAGTCCGCCCACCGGTACCA
Downstream region at tRNA end position 
tattccaaga
Secondary structure (Cloverleaf model)
>W1910001171	Leu	CAA
                   t      ACCA tattccaaga
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C C G C C     A
      T A A        G      | | | | |     A
    T       A G T G       G G C G G     C
    G         | | |                 T T
    G       A C A C
      T A T        G     TGCCTTCGGGCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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