The detailed information of tRNA gene sequence


Sequence ID>W1910006565
Genome IDBAOS01000014
Search identical group
Phylum/ClassPlanctomycetota
SpeciesCandidatus Scalindua japonica japonica husup-a2 [BAOS]
Start position on genome 61381
End posion on genome 61458
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtataaatgt
tRNA gene sequence 
CGGGGCGTGGCTCAGCTTGGCTAGAGTGTCCGCCTTGGGAGCGGAAGGTCGCTGGTTCGA
ATCCAGTCGCCCCGACCA
Downstream region at tRNA end position 
ttttaccaga
Secondary structure (Cloverleaf model)
>W1910006565	Pro	TGG
                   t      ACCA ttttaccaga
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G A C C     A
    T C G A        G      + | | | |     G
  T         C T C G       G C T G G     C
  G         | | | +                 T T
  G         G A G T
    C T A          G     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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