The detailed information of tRNA gene sequence


Sequence ID>W1910015293
Genome IDBDMD01000011
Search identical group
Phylum/ClassThermoproteota
SpeciesAeropyrum pernix YK1-12-2013 [BDMD]
Start position on genome 12411
End posion on genome 12335
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggggtagcct
tRNA gene sequence 
AGCGGGGTAGGGTAGCCTGGCAGCCCGCGGGGCTCATAACCCCGAGGTCGGTGGTTCAAA
TCCACCCCCCGCTACCA
Downstream region at tRNA end position 
taagcggggc
Secondary structure (Cloverleaf model)
>W1910015293	Met	CAT
                   t      ACCA taagcggggc
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C A C C     A
      C G A        A      | | | | |     A
    C       T G G G       G G T G G     C
    T       + | | |                 T T
    G       G C C C
      G C A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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