The detailed information of tRNA gene sequence


Sequence ID>W1910015296
Genome IDBDMD01000015
Search identical group
Phylum/ClassThermoproteota
SpeciesAeropyrum pernix YK1-12-2013 [BDMD]
Start position on genome 24060
End posion on genome 24137
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
aagcgcggga
tRNA gene sequence 
GCCGCGGTAGTATAGCCCGGCCCAGTATGCGGGCCTCTCGAGCCCGTGACCCGGGTTCAA
ATCCCGGCCGCGGCACCA
Downstream region at tRNA end position 
ctgcacaggg
Secondary structure (Cloverleaf model)
>W1910015296	Glu	CTC
                   a      ACCA ctgcacaggg
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         T A T G       C C G G G     C
  G         + | | +                 T T
  G         G T A T
    C C C A        G     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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