The detailed information of tRNA gene sequence


Sequence ID>W1910015299
Genome IDBDMD01000019
Search identical group
Phylum/ClassThermoproteota
SpeciesAeropyrum pernix YK1-12-2013 [BDMD]
Start position on genome 18947
End posion on genome 18870
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ccaagtttgt
tRNA gene sequence 
GGGGCCGTCGTCTAGCCTGGCTAGGATGCGGGGCTTGGGACCCCGTGGTCCGGGGTTCAA
ATCCCCGCGGCCCCACCA
Downstream region at tRNA end position 
gcttagcgga
Secondary structure (Cloverleaf model)
>W1910015299	Pro	TGG
                   t      ACCA gcttagcgga
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       C G G G G     C
  G         + | | +                 T T
  G         G G A T
    C T A          G     TGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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