The detailed information of tRNA gene sequence


Sequence ID>W1910015300
Genome IDBDMD01000019
Search identical group
Phylum/ClassThermoproteota
SpeciesAeropyrum pernix YK1-12-2013 [BDMD]
Start position on genome 9192
End posion on genome 9115
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ggagccccgg
tRNA gene sequence 
GGGCCCGTCGTCTAGCCTGGTTAGGACGCCGCCCTCACACGGCGGAGGTCCGGGGTTCAA
ATCCCCGCGGGCCCACCA
Downstream region at tRNA end position 
agcctacctt
Secondary structure (Cloverleaf model)
>W1910015300	Val	CAC
                   g      ACCA agcctacctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       C G G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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