The detailed information of tRNA gene sequence


Sequence ID>W1910015304
Genome IDBDMD01000039
Search identical group
Phylum/ClassThermoproteota
SpeciesAeropyrum pernix YK1-12-2013 [BDMD]
Start position on genome 925
End posion on genome 837
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttagagggt
tRNA gene sequence 
GCCGGGGTGGCCGAGCGGCCCAAGGCGGCGGGCTTGAGACCCGTTGCCCCGCGAGGGGCG
CGCGGGTTCGAATCCCGCCCCCGGCGCCA
Downstream region at tRNA end position 
cacactacaa
Secondary structure (Cloverleaf model)
>W1910015304	Ser	TGA
                   t      GCCA cacactacaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      C C A        G     TGCCCCGCGAGGGGCGC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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