The detailed information of tRNA gene sequence


Sequence ID>C09103629
Genome IDCP001287
Search identical group
Phylum/ClassCyanobacteriota
SpeciesRippkaea orientalis PCC 8801 [CP001287]
Start position on genome 3921695
End posion on genome 3921623
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tggtgtatac
tRNA gene sequence 
GGGGCTATAACTCAGTTGGTAGAGTGTCACAATGGCATTGTGAAAGTCAGCGGTTCGAGT
CCGCTTAGCTCCAtta
Downstream region at tRNA end position 
attcaaatca
Secondary structure (Cloverleaf model)
>C09103629	Ala	GGC
                   c      Atta attcaaatca
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C A       A G C G G     C
    G       | | | |                 T T
    G       G A G T
      T A          G     AAGTC
                    T - A
                    C - G
                    A - T
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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