The detailed information of tRNA gene sequence


Sequence ID>C09102347
Genome IDCP001357
Search identical group
Phylum/ClassSpirochaetota
SpeciesBrachyspira hyodysenteriae WA1 WA1; ATCC 49526 [CP001357]
Start position on genome 1286951
End posion on genome 1286876
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
aaaaacttaT
tRNA gene sequence 
GTGCCTGTAGCTCAATTGGATAGAGCATCAGATTGCGGTTCTGAAGGTTGGAAGTTCAAA
TCTTCTCAGGCACGTtt
Downstream region at tRNA end position 
ctataattag
Secondary structure (Cloverleaf model)
>C09102347	Arg	GCG
                   T      GTtt ctataattag
                     G - C
                     T - A
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T C T T C     A
      T A A        A      + | | | |     A
    T       C T C G       G G A A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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