The detailed information of tRNA gene sequence


Sequence ID>C09103164
Genome IDCP001277
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesCandidatus Hamiltonella defensa 5AT [Acyrthosiphon pisum] T5A [CP001277]
Start position on genome 13102
End posion on genome 13178
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
agtttattta
tRNA gene sequence 
GCACCCGTAGCTCAGCTGGATAGAGTACCCGGCTACGAACCGGGCGGTCGGAGGTTCGAA
TCCTCCTGGGTGCACCA
Downstream region at tRNA end position 
aagttttttg
Secondary structure (Cloverleaf model)
>C09103164	Arg	ACG
                   a      ACCA aagttttttg
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G + T          T A
                    T     C C T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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