The detailed information of tRNA gene sequence


Sequence ID>W1910142062
Genome IDBIFT01000001
Search identical group
Phylum/ClassChloroflexota
SpeciesDictyobacter alpinus Uno16 [BIFT]
Start position on genome 336545
End posion on genome 336643
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
acaaaagcat
tRNA gene sequence 
GGAGGTGTAGGGGCCCCGGTGGGTCTCACCGTCTTCAAAACGGCTGGGGGGTCGCTCGGC
GCGGTCCCCGGTGAGTTCGACTCTCATACACCTCTGCCA
Downstream region at tRNA end position 
cgccctattt
Secondary structure (Cloverleaf model)
>W1910142062	Sec	TCA
                   t      GCCA cgccctattt
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T - A          T C
                    A     T A C T C     A
      C C C        G      + | | | |     G
    G       C G G G       G T G A G     C
    G       | + | +                 T T
    T       G T C T
      G G          C     TGGGGGGTCGCTCGGCGCGGTCCCCG
                    A   C
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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