The detailed information of tRNA gene sequence


Sequence ID>W1910142311
Genome IDBIFX01000001
Search identical group
Phylum/ClassChloroflexota
SpeciesThermosporothrix hazakensis SK20-1 [BIFX]
Start position on genome 1826814
End posion on genome 1826717
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
caacacaaac
tRNA gene sequence 
AGGGAGGTGTAGGGGTCCCGGTGGGCCTCACCGTCTTCAAAACGGCTGGAGGGTCGCTCG
GCGCGGTCCTCGGTGGGTTCGACTCCCATACGCCTCTGtca
Downstream region at tRNA end position 
ctcttcctgc
Secondary structure (Cloverleaf model)
>W1910142311	Sec	TCA
                   c      Gtca ctcttcctgc
                     A - T
                     G - C
                     G + T
                     G - C
                     A   C
                     G   G
                     G - C
                     T - A          T C
                    G     T A C C C     A
    C C T G        T      + | | | |     G
  C         G G G A       G T G G G     C
  G           | | |                 T T
  G         G C C T
    T G G          C     TGGAGGGTCGCTCGGCGCGGTCCTCG
                    A   C
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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