The detailed information of tRNA gene sequence


Sequence ID>W1910194342
Genome IDCZDF01000179
Search identical group
Phylum/ClassCyanobacteriota
SpeciesPlanktothrix tepida PCC 9214 [CZDF]
Start position on genome 17568
End posion on genome 17478
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tttcaggttT
tRNA gene sequence 
GGAGAGGTGGCAGAGTTGGTCGAATGCGGCAGACTCGAAATCTGTTAGGGGTCTTGCACT
CCTCGTGGGTTCGAATCCCACCCTCTCCGTtt
Downstream region at tRNA end position 
tcagaatttc
Secondary structure (Cloverleaf model)
>W1910194342	Ser	CGA
                   T      GTtt tcagaatttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G A C G       G T G G G     C
  G           | | |                 T T
  T         A T G C
    C G A          G     TAGGGGTCTTGCACTCCTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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