The detailed information of tRNA gene sequence


Sequence ID>W1910200310
Genome IDFJMQ01000071
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus litoralis [FJMQ]
Start position on genome 13029
End posion on genome 12952
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgggtcgtgc
tRNA gene sequence 
AGCGGGGTGGGGCAGCTAGGAGTGCCCGCCGGGCTCATAACCCGGAGGTCGGAGGTTCAA
ATCCTCCCCCCGCTACCA
Downstream region at tRNA end position 
gcctattttt
Secondary structure (Cloverleaf model)
>W1910200310	Met	CAT
                   c      ACCA gcctattttt
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C T C C     A
    T C G A        G      | | | | |     A
  A         C G G G       G G A G G     C
  G         | | | |                 T T
  G         G C C C
    A G T          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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