The detailed information of tRNA gene sequence


Sequence ID>W1910200316
Genome IDFJMQ01000103
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus litoralis [FJMQ]
Start position on genome 28740
End posion on genome 28815
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ttgggttcgt
tRNA gene sequence 
GCCGCCGTAGCTTAGTCGGTAGAGCGCCGGACTGTTAATCCGGTGGTCGCCCGTTCAAGT
CGGGCCGGCGGCGCCA
Downstream region at tRNA end position 
gtcttcgtgg
Secondary structure (Cloverleaf model)
>W1910200316	Asn	GTT
                   t      GCCA gtcttcgtgg
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     C G G G C     A
      T G A        A      | | | | |     A
    C       T T C G       G C C C G     C
    G       + | | |                 T T
    G       G A G C
      T A          G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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