The detailed information of tRNA gene sequence


Sequence ID>W1910229725
Genome IDFOCX01000031
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorientalis persicus IBRC-M 10043 [FOCX]
Start position on genome 19042
End posion on genome 18972
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggctggagca
tRNA gene sequence 
TGCGGGATAGGGTAGCGGTAGCCCACAGGGCTCATATCCCCGAGGCCCAGGTTCGACTCC
TGGTCCCGCAAtgg
Downstream region at tRNA end position 
cgggtagtcc
Secondary structure (Cloverleaf model)
>W1910229725	Met	CAT
                   a      Atgg cgggtagtcc
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T C
                    T     G G T C C     A
        G A        A      | | | | |     G
      C     T G G G       C C A G G     C
      G     + | | |                 T T
      G     G C C C
        T A        A     AGGC
                    C - G
                    A   C
                    G - C
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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