The detailed information of tRNA gene sequence


Sequence ID>W1910229727
Genome IDFOCX01000031
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorientalis persicus IBRC-M 10043 [FOCX]
Start position on genome 18818
End posion on genome 18748
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gtgcccactc
tRNA gene sequence 
GGACGCATGGTCCAACGGCAAGATACGGCCCTCACGAGGCTGTGATCGAGGTTCGATTCC
TCGTGCGTCCAtcg
Downstream region at tRNA end position 
gcagcgaggg
Secondary structure (Cloverleaf model)
>W1910229727	Val	CAC
                   c      Atcg gcagcgaggg
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     C - G
                     A - T          T T
                    T     G C T C C     A
        A A        G      | | | | |     G
      C     C C T G       C G A G G     C
      G       | | +                 T T
      G     A G A T
        C A        A     TGAT
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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