The detailed information of tRNA gene sequence


Sequence ID>W1910230513
Genome IDFOTC01000006
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalogranum rubrum CGMCC 1.7738 [FOTC]
Start position on genome 163703
End posion on genome 163632
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gccgtagcag
tRNA gene sequence 
GGGGATGTAGTCCAATGGTACGACACCTGCCTCCAGAGCAGGTAATGGCTGTTCGAATCA
GTCCGTCCCCACtc
Downstream region at tRNA end position 
cacggtagcc
Secondary structure (Cloverleaf model)
>W1910230513	Trp	CCA
                   g      ACtc cacggtagcc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     G - C          T A
                    T     C T G A C     A
        A A        A      | + | | |     G
      T     C C T G       G G C T G     C
      G       | | |                 T T
      G     C G A C
        T A        A     TAAT
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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