The detailed information of tRNA gene sequence


Sequence ID>W1910230730
Genome IDFOYT01000001
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalogeometricum rufum CGMCC 1.7736 [FOYT]
Start position on genome 675563
End posion on genome 675637
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgaacgaatc
tRNA gene sequence 
GGGCCCTTAGCTCAGTCTGGTTAGAGCGCTCGGCTCATAACCGAGTGGTCGATGGTTCGA
ATCCGTCAGGGCCCAtag
Downstream region at tRNA end position 
aaacgacgga
Secondary structure (Cloverleaf model)
>W1910230730	Met	CAT
                   c      Atag aaacgacgga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C T G C C     A
    C T G A        A      | | + | |     G
  T         C T C G       G A T G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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