The detailed information of tRNA gene sequence


Sequence ID>W145003171
Genome IDAVGI01000235
Search identical group
Phylum/ClassBacillota
SpeciesClostridioides difficile CD3 [AVGI]
Start position on genome 7284
End posion on genome 7188
Amino Acid seC
Anticodon TCA
Upstream region at tRNA start position 
atttcattat
tRNA gene sequence 
GGGAGTGGATGGGTGCCGGTGTGCCCTCTAGTCTTCAAAACTAGTATGAGGGGTTAAGAG
CCTCTTAGGTGGGTTCGATTCCCCCGCATTCCCGCCA
Downstream region at tRNA end position 
atatgtaaaa
Secondary structure (Cloverleaf model)
>W145003171	seC	TCA
                   t      GCCA atatgtaaaa
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G   G          T T
                    A     C C C C C     A
      C C G        T      |   | | |     G
    G       T G G G       G T G G G     C
    G       + | | |                 T T
    T       G C C C
      G T          T     TATGAGGGGTTAAGAGCCTCTTAG
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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