The detailed information of tRNA gene sequence


Sequence ID>C09100399
Genome IDCP001219
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferrooxidans ATCC 23270 [CP001219]
Start position on genome 1032802
End posion on genome 1032726
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tacacgtcat
tRNA gene sequence 
GATCTATTAGCTCAGATGGCCAGAGCGCCGCCCTGTCACGGCGGAGGTCGCCGGTTCAAG
CCCGGCATAGATCGCCA
Downstream region at tRNA end position 
attttgtcgg
Secondary structure (Cloverleaf model)
>C09100399	Asp	GTC
                   t      GCCA attttgtcgg
                     G - C
                     A - T
                     T - A
                     C - G
                     T - A
                     A - T
                     T - A          C G
                    T     C G G C C     A
      A G A        A      | | | | |     A
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      C C A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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