The detailed information of tRNA gene sequence


Sequence ID>C09111138
Genome IDCP001636
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax paradoxus [CP001636]
Start position on genome 891635
End posion on genome 891560
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cacatacagt
tRNA gene sequence 
GATCCGTTAACTCAGCGGCCAGAGTGCCTCCCTGTCCAGGAGGAAGCCAAGGGTTCAACT
CCCTTACGGATCGCCA
Downstream region at tRNA end position 
cccaccacgc
Secondary structure (Cloverleaf model)
>C09111138	Asp	GTC
                   t      GCCA cccaccacgc
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          T C
                    T     T T C C C     A
      C G A        A      | | | | |     A
    G       C T C A       A A G G G     C
    G       | | | |                 T T
    C       G A G T
      C A          G     AAGCC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       C
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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