The detailed information of tRNA gene sequence


Sequence ID>C09100404
Genome IDCP001219
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferrooxidans ATCC 23270 [CP001219]
Start position on genome 1028407
End posion on genome 1028333
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tgggcaccat
tRNA gene sequence 
GCTTCCATCGGCTATCGGTCAGGCCGCCGGGTTCTCAACCAGGAAAGGCGGGTTCAACTC
CCGCTGGAAGTACCA
Downstream region at tRNA end position 
tttttgtttc
Secondary structure (Cloverleaf model)
>C09100404	Glu	CTC
                   t      ACCA tttttgtttc
                     G + T
                     C - G
                     T - A
                     T - A
                     C - G
                     C - G
                     A - T          T C
                    T     C G C C C     A
      C T A        C      | | | | |     A
    G       T C G G       G C G G G     C
    G       + | | |                 T T
    T       G G C C
      C A          G     AAAG
                    C - G
                    C - G
                    G   A
                    G - C
                    G - C
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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