The detailed information of tRNA gene sequence


Sequence ID>C141000319
Genome IDAP014507
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga elfii DSM 9442 = NBRC 107921 [AP014507]
Start position on genome 94602
End posion on genome 94678
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atatatgcgt
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGCAGCTCGTTGGGCTCATAACCCAAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
gagattaaca
Secondary structure (Cloverleaf model)
>C141000319	Met	CAT
                   t      ACCA gagattaaca
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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