The detailed information of tRNA gene sequence


Sequence ID>C141000325
Genome IDAP014507
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga elfii DSM 9442 = NBRC 107921 [AP014507]
Start position on genome 541211
End posion on genome 541286
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
tataccacgg
tRNA gene sequence 
TGGGGCGTAGCCAAGCTGGTAAGGCATCGGACTTTGGATCCGACATTCGGAGGTTCGAAT
CCTCCCGCCCCAGCCA
Downstream region at tRNA end position 
gaaaagcggg
Secondary structure (Cloverleaf model)
>C141000325	Gln	TTG
                   g      GCCA gaaaagcggg
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C C T C C     A
      C G A        A      | | | | |     G
    T       A C C G       G G A G G     C
    G         | | |                 T T
    G       A G G C
      T A          A     CATTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.-

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