The detailed information of tRNA gene sequence


Sequence ID>C141000327
Genome IDAP014507
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga elfii DSM 9442 = NBRC 107921 [AP014507]
Start position on genome 577398
End posion on genome 577475
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aattggtgtt
tRNA gene sequence 
GGGGACGTGGTGCAGCTTGGTTAGCATGCCGGTCTGTCACACCGGTGGCCGCGGGTTCAA
GTCCCGTCGTCCCCGCCA
Downstream region at tRNA end position 
gagggaggca
Secondary structure (Cloverleaf model)
>C141000327	Asp	GTC
                   t      GCCA gagggaggca
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     T G C C C     A
    T C G A        G      + | | | |     A
  T         C G T G       G C G G G     C
  G         | | | +                 T T
  G         G C A T
    T T A          G     TGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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