The detailed information of tRNA gene sequence


Sequence ID>C141000333
Genome IDAP014507
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga elfii DSM 9442 = NBRC 107921 [AP014507]
Start position on genome 1348219
End posion on genome 1348306
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tttcatggct
tRNA gene sequence 
GCCGAGGTGGCGGAACTGGCAGACGCGACTGACTCAAAATCAGTTGAGGGATGACCTCGT
GCGGGTTCAACTCCCGCCCTCGGCACCA
Downstream region at tRNA end position 
gttttttctt
Secondary structure (Cloverleaf model)
>C141000333	Leu	CAA
                   t      ACCA gttttttctt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    T     C G C C C     A
      C A A        G      | | | | |     A
    T       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGAGGGATGACCTCGT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.-

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