The detailed information of tRNA gene sequence


Sequence ID>C141000341
Genome IDAP014507
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga elfii DSM 9442 = NBRC 107921 [AP014507]
Start position on genome 1625575
End posion on genome 1625650
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cagtggttgt
tRNA gene sequence 
GGGCTCGTAGCTCAACTGGTAGAGCGCCCGGCTCATAACCGGGCGGTCGGTGGTTCGAGT
CCACCCGAGCCCACCA
Downstream region at tRNA end position 
cgggagcttc
Secondary structure (Cloverleaf model)
>C141000341	Met	CAT
                   t      ACCA cgggagcttc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T G
                    T     C C A C C     A
      C A A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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