The detailed information of tRNA gene sequence


Sequence ID>C141000350
Genome IDAP014507
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga elfii DSM 9442 = NBRC 107921 [AP014507]
Start position on genome 2045518
End posion on genome 2045443
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caccatgggc
tRNA gene sequence 
GGGGACGTAGCTCAGCTGGGAGAGCGCCTGCTTTGCAAGCAGGAAGTCAGGGGTTCGAAT
CCCCTCGTCTCCACCA
Downstream region at tRNA end position 
atggaagggt
Secondary structure (Cloverleaf model)
>C141000350	Ala	TGC
                   c      ACCA atggaagggt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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