The detailed information of tRNA gene sequence


Sequence ID>C141000351
Genome IDAP014507
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga elfii DSM 9442 = NBRC 107921 [AP014507]
Start position on genome 1827384
End posion on genome 1827307
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaaaacagT
tRNA gene sequence 
GGCGGTGTAGCTCAGCTGGTCAGAGCGAGTGATTCATAATCACTATGTCGTGGGTTCGAG
TCCCACCGCCGCCACCC
Downstream region at tRNA end position 
gaaggcagct
Secondary structure (Cloverleaf model)
>C141000351	Met	CAT
                   T      ACCC gaaggcagct
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     C A C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     ATGTC
                    A - T
                    G - C
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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