The detailed information of tRNA gene sequence


Sequence ID>C141000368
Genome IDAP014508
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [AP014508]
Start position on genome 1173601
End posion on genome 1173677
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgactcgaga
tRNA gene sequence 
GGGCTCGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGAGGTTCGAG
TCCTCCCGAGCCCACCA
Downstream region at tRNA end position 
tggaggggac
Secondary structure (Cloverleaf model)
>C141000368	Ile	GAT
                   a      ACCA tggaggggac
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T G
                    T     C C T C C     A
      G G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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