The detailed information of tRNA gene sequence


Sequence ID>C141000369
Genome IDAP014508
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [AP014508]
Start position on genome 1173682
End posion on genome 1173757
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ccaccatgga
tRNA gene sequence 
GGGGACGTAGCTCAGCTGGGAGAGCGCCTGCTTTGCAAGCAGGAAGTCAGGGGTTCGAAT
CCCCTCGTCTCCACCA
Downstream region at tRNA end position 
agggaagggt
Secondary structure (Cloverleaf model)
>C141000369	Ala	TGC
                   a      ACCA agggaagggt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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