The detailed information of tRNA gene sequence


Sequence ID>C141000376
Genome IDAP014508
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [AP014508]
Start position on genome 1556866
End posion on genome 1556939
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
acaaaggcga
tRNA gene sequence 
TGGGAGGTCGTCTAACGGTAGGACAGCGGACTCTGGATCCGCCGGTGGAGGTTCGAGTCC
TCCCCTCCCAGCCA
Downstream region at tRNA end position 
ggatgatgcg
Secondary structure (Cloverleaf model)
>C141000376	Gln	CTG
                   a      GCCA ggatgatgcg
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T G
                    T     C C T C C     A
        A A        C      | | | | |     G
      C     T C T G       G G A G G     C
      G     + | | |                 T T
      G     G G A C
        T A        A     CGGT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.-

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