The detailed information of tRNA gene sequence


Sequence ID>C141000378
Genome IDAP014508
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [AP014508]
Start position on genome 1785124
End posion on genome 1785210
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
caaactgggt
tRNA gene sequence 
GGTGAGGTGCCCGAGTGGCCTAAGGGGGCGGACTGTAAATCCGCTGGCGGATCGCCTTCG
GAGGTTCAAATCCTCCCCTCACCACCA
Downstream region at tRNA end position 
tttgatttct
Secondary structure (Cloverleaf model)
>C141000378	Tyr	GTA
                   t      ACCA tttgatttct
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C T C C     A
      T G A        G      | | | | |     A
    G       G C C C       G G A G G     C
    G         | | |                 T T
    C       A G G G
      C T A        G     TGGCGGATCGCCTTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.-

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