The detailed information of tRNA gene sequence


Sequence ID>C141000383
Genome IDAP014508
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [AP014508]
Start position on genome 1874048
End posion on genome 1874124
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gataatgcgt
tRNA gene sequence 
GGGGCCGTAGCTCAGTTTGGGAGAGCGCTACCATGGCACGGTAGAGGTCGTGGGTTCAAG
TCCCATCGGCTCCACCA
Downstream region at tRNA end position 
gagggggaac
Secondary structure (Cloverleaf model)
>C141000383	Ala	GGC
                   t      ACCA gagggggaac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     T A C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G T G G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  A       C
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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