The detailed information of tRNA gene sequence


Sequence ID>C141000384
Genome IDAP014508
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [AP014508]
Start position on genome 1893337
End posion on genome 1893412
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gaactggcgc
tRNA gene sequence 
TCCGGCGTAGCTCAACCGGCAGAGCGGGTGGCTGTTAACCACTAGGTTGCAGGTTCGAGT
CCTGCCGCCGGAGCCA
Downstream region at tRNA end position 
agcttcaaat
Secondary structure (Cloverleaf model)
>C141000384	Asn	GTT
                   c      GCCA agcttcaaat
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C G T C C     A
      C A A        A      | | | | |     G
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    G + T
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.-

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