The detailed information of tRNA gene sequence


Sequence ID>C141000388
Genome IDAP014508
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [AP014508]
Start position on genome 2071143
End posion on genome 2071218
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gcacgtgtga
tRNA gene sequence 
GCCAGCGTAGCTCAGTCGGCAGAGCGGCGCACTCGTAATGCGCAGGTCGGGGGTTCGAAT
CCCTTCGCTGGCTCCA
Downstream region at tRNA end position 
tttttctttc
Secondary structure (Cloverleaf model)
>C141000388	Thr	CGT
                   a      TCCA tttttctttc
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T T C C C     A
      T G A        A      + + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    G - C
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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