The detailed information of tRNA gene sequence


Sequence ID>C141000389
Genome IDAP014508
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [AP014508]
Start position on genome 2136574
End posion on genome 2136484
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttgtgtgtac
tRNA gene sequence 
GCCGAGGTGGCGGAACTGGCAGACGCGACTGACTCAAAATCAGTTGAGGGTTGACCCCCT
CGTGCGGGTTCGACTCCCGCCCTCGGCACCA
Downstream region at tRNA end position 
aacccgccgt
Secondary structure (Cloverleaf model)
>C141000389	Leu	CAA
                   c      ACCA aacccgccgt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    T     C G C C C     A
      C A A        G      | | | | |     G
    T       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGAGGGTTGACCCCCTCGT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.-

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