The detailed information of tRNA gene sequence


Sequence ID>C141000394
Genome IDAP014508
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [AP014508]
Start position on genome 1994045
End posion on genome 1993959
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
acgacggcgc
tRNA gene sequence 
GCCGAGGTGGCGGAAATGGCAGACGCGCATGACTCAGGATCATGTGGGTTTCCACCCGTG
CGGGTTCAAGTCCCGCCCTCGGCACCA
Downstream region at tRNA end position 
gaaggccggg
Secondary structure (Cloverleaf model)
>C141000394	Leu	CAG
                   c      ACCA gaaggccggg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T G
                    T     C G C C C     A
      A A A        G      | | | | |     A
    T       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGGGTTTCCACCCGT
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.-

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