The detailed information of tRNA gene sequence


Sequence ID>C141000395
Genome IDAP014508
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [AP014508]
Start position on genome 1894468
End posion on genome 1894391
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ataaaagctg
tRNA gene sequence 
CGGGGCGTGGCGCAGATTGGCTAGCGCGCTTGCATGGGGCGCAAGAGGTCGCTGGTTCAA
GTCCAGTCGCCCCGACCA
Downstream region at tRNA end position 
ggcggcgaga
Secondary structure (Cloverleaf model)
>C141000395	Pro	GGG
                   g      ACCA ggcggcgaga
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G A C C     A
    T A G A        G      + | | | |     A
  T         C G C G       G C T G G     C
  G         | | | |                 T T
  G         G C G C
    C T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       C
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.-

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