The detailed information of tRNA gene sequence


Sequence ID>C141000396
Genome IDAP014508
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [AP014508]
Start position on genome 1893634
End posion on genome 1893559
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ccttggttga
tRNA gene sequence 
GCCCCCATCGTCTAGCGGCCTAGGACACTGGCCTTTCAAGCCAGAAGCAGGGGTTCGAAT
CCCCTTGGGGGCGCCA
Downstream region at tRNA end position 
gagtgttcta
Secondary structure (Cloverleaf model)
>C141000396	Glu	TTC
                   a      GCCA gagtgttcta
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     AAGC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.-

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