The detailed information of tRNA gene sequence


Sequence ID>C141000399
Genome IDAP014508
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [AP014508]
Start position on genome 1381947
End posion on genome 1381872
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtggccggaa
tRNA gene sequence 
GGCGACGTAGCCAAGCGGTTAAGGCGGGGGTCTGCAAAATCCCTATGCGTGGGTTCGAAT
CCCACCGTCGCCTCCA
Downstream region at tRNA end position 
ggggagggtc
Secondary structure (Cloverleaf model)
>C141000399	Cys	GCA
                   a      TCCA ggggagggtc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        A      | | | | |     G
    G       A C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TATGC
                    G - C
                    G - C
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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